Fizykochemia miękkiej materii
Kierownik zespołu
prof. dr hab. Robert Hołyst
Tematyka badawcza
Analizujemy reakcje biochemiczne na poziomie pojedynczych molekuł stosując metody spektroskopowe ze zliczaniem pojedynczych fotonów. Badamy reakcje biochemiczne w probówce i w żywych komórkach. Oprócz tego rozwijamy nowe metody nierównowagowej fizyki statystycznej. Tworzymy również podłoża do SERSa.
Członkowie
- Prof. Robert Hołyst - Team Leader
- Prof. Anna Maciołek
- Prof. Andrzej Poniewierski
- Dr. Karina Kwapiszewska
- Dr. Tomasz Kalwarczyk
- Dr. Grzegorz Bubak
- Dr. Tomasz Andryszewski
- Dr. Michalina Iwan
- Dr. Karol Makuch
- Dr. Paweł Żuk
- Dr. Jeffrey Everts
- Dr. Marta Pilz
- MSc. Monika Księżopolska-Gocalska Monika
- MSc. Paweł Albrycht
- Aneta Karpińska, PhD Student
- Alicja Zgorzelska, PhD Student
- Karolina Kucharska, PhD Student
- Sakshi Sareen, PhD Student
- Adam Kowalski, PhD Student
- Joanna Buczkowska, Student
- Katarzyna Ulewicz, Student
- Jarosław Michalski, Student
- Antoni Lis, Student
- Zuzanna Pieczara, Student
- Tomasz Piros, Student
- Krystyna Pszczółkowska, Administration
- Kuźma Patrycja, Research Group Coordinator & Lab Manager
Publikacje
2021
Richter, Ł., Księżarczyk, K., Paszkowska, K., Janczuk-Richter, M., Niedziółka-Jönsson, J., Gapiński, J., Łoś, M., Hołyst, R., & Paczesny, J.
Adsorption of bacteriophages on polypropylene labware affects the reproducibility of phage research.
Scientific Reports, https://doi.org/10.1038/s41598-021-86571-x
Everts, J. C., & Ravnik, M.
Ionically Charged Topological Defects in Nematic Fluids.
Physical Review X, https://doi.org/10.1103/PhysRevX.11.011054
Agasty, A., Wisniewska, A., Kalwarczyk, T., Koynov, K., & Holyst, R.
Macroscopic Viscosity of Polymer Solutions from the Nanoscale Analysis.
ACS Appl. Polym. Mater., https://doi.org/10.1021/acsapm.1c00348
Kucharska, K., Pilz, M., Bielec, K., Kalwarczyk, T., Kuźma, P., & Hołyst, R.
Two Intercalation Mechanisms of Oxazole Yellow Dimer (YOYO-1) into DNA.
Molecules, https://doi.org/10.3390/molecules26123748
Kleczewska, N., Sikorski, P. J., Warminska, Z., Markiewicz, L., Kasprzyk, R., Baran, N., Kwapiszewska, K., Karpinska, A., Michalski, J., Holyst, R., Kowalska, J., & Jemielity, J.
Cellular delivery of dinucleotides by conjugation with small molecules: targeting translation initiation for anticancer applications.
Chemical Science, https://doi.org/10.1039/D1SC02143E
Al-Otaibi, J. S., Albrycht, P., Mary, Y. S., Mary, Y. S., & Księżopolska-Gocalska, M.
Concentration-dependent SERS profile of olanzapine on silver and silver-gold metallic substrates.
Chemical Papers, https://doi.org/10.1007/S11696-021-01783-9
Kalwarczyk, T., Bielec, K., Burdzy, K., & Holyst, R.
Influence of molecular rebindings on the reaction rate of complex formation.
Physical Chemistry Chemical Physics, https://doi.org/10.1039/D1CP02820K
Al-Otaibi, J. S., Albrycht, P., Mary, Y. S., Mary, Y. S., & Księżopolska-Gocalska, M.
Concentration-dependent SERS profile of olanzapine on silver and silver-gold metallic substrates.
Chemical Papers, https://doi.org/10.1007/S11696-021-01783-9
Albrycht, P., Al-Otaibi, J. S., Mary, Y. S., Mary, Y. S., Trivedi, R., & Chakraborty, B.
Surface enhanced Raman scattering investigation of pioglitazone on silver and silver-gold metal substrates – Experimental analysis and theoretical modeling.
Journal of Molecular Structure, https://doi.org/10.1016/J.MOLSTRUC.2021.130992
Richter, Ł., Paszkowska, K., Cendrowska, U., Olgiati, F., Silva, P., Gasbarri, M., Guven, P., Paczesny, J., & Stellacci, F.
Broad-spectrum nanoparticles against bacteriophage infections.
Nanoscale, https://doi.org/10.1039/D1NR04936D
Aneta Karpińska, Marta Pilz, Joanna Buczkowska, J. Żuk, P., Karolina Kucharska, Gaweł Magiera, Karina Kwapiszewska, & Robert Hołyst
Quantitative analysis of biochemical processes in living cells at a single-molecule level: a case of olaparib–PARP1 (DNA repair protein) interactions.
Analyst, https://doi.org/10.1039/D1AN01769A
Stumpf, B. H., Nowakowski, P., Eggeling, C., Maciołek, A., & Smith, A.-S.
Protein induced lipid demixing in homogeneous membranes.
Physical Review Research, https://doi.org/10.1103/PhysRevResearch.3.L042013
Gizynski, K., Makuch, K., Paczesny, J., Zhang, Y., Maciołek, A., & Holyst, R.
Internal energy in compressible Poiseuille flow.
Physical Review E, https://doi.org/10.1103/PhysRevE.104.055107
2022
Bielec, K., Kowalski, A., Bubak, G., Witkowska Nery, E., & Hołyst, R.
Ion Complexation Explains Orders of Magnitude Changes in the Equilibrium Constant of Biochemical Reactions in Buffers Crowded by Nonionic Compounds.
The Journal of Physical Chemistry Letters, https://doi.org/10.1021/ACS.JPCLETT.1C03596
Araki, T., Gomez-Solano, J. R., & Maciołek, A.
Relaxation to steady states of a binary liquid mixture around an optically heated colloid.
Physical Review E, https://doi.org/10.1103/PhysRevE.105.014123
Khan, F., Jaoui, M., Rudziński, K., Kwapiszewska, K., Martinez-Romero, A., Gil-Casanova, D., Lewandowski, M., Kleindienst, T. E., Offenberg, J. H., Krug, J. D., Surratt, J. D., & Szmigielski, R.
Cytotoxicity and oxidative stress induced by atmospheric mono-nitrophenols in human lung cells.
Environmental Pollution, https://doi.org/10.1016/J.ENVPOL.2022.119010
Żuk, P. J., Tużnik, B., Rymarz, T., Kwiatkowski, K., Dudyński, M., Galeazzo, F. C. C., & Krieger Filho, G. C.
OpenFOAM solver for thermal and chemical conversion in porous media.
Computer Physics Communications, https://doi.org/10.1016/J.CPC.2022.108407